gmt dataset

gmt_example

gmt_example

Markers of 5 glial cell-types

Format

A list with 5 character vectors, each containing genes.

  • Astrocytes_panglao: astrocyte markers identified by panglao
  • Schwann_panglao: Schwann markers identified by panglao
  • Bergmann glia_panglao: Bergmann glia markers identified by panglao
  • Kupffer_panglao: Kupffer markers identified by panglao
  • Oligodendrocyte progenitor_panglao: Oligodendrocyte progenitor markers identified by panglao
data(gmt)

Details

A named list containing the cell-type markers of 5 glial cell types. Used for testing cell-type naming functions.

Examples

data(gmt)
  • Maintainer: Dustin Sokolowski
  • License: GPL-3
  • Last published: 2023-06-30

About the dataset

  • Number of columns: 5
  • Class: list

Column names and types

  • Astrocytes_panglao:character
  • Schwann cells_panglao:character
  • Bergmann glia_panglao:character
  • Kupffer cells_panglao:character
  • Oligodendrocyte progenitor cells_panglao:character