gut_microbiome dataset

• Maintainer: Yang Cao
• License: GPL (>= 2)
• Last published: 2016-04-03

Column names and types (First 10)

• Bacteroides_uniformis_ATCC_8492:character
• Alistipes_putredinis_DSM_17216:character
• Parabacteroides_merdae_ATCC_43184:character
• Dorea_longicatena_DSM_13814:character
• Bacteroides_caccae_ATCC_43185:character
• Ruminococcus_bromii_L2_63:character
• Bacteroides_thetaiotaomicron_VPI_5482:character
• Eubacterium_hallii_DSM_3353:character
• Ruminococcus_lactaris_ATCC_29176:character
• Bifidobacterium_adolescentis_L2_32:character
• Ruminococcus_torques_L2_14:character
• Akkermansia_muciniphila_ATCC_BAA_835:character
• Butyrivibrio_crossotus_DSM_2876:character
• Dorea_formicigenerans_ATCC_27755:character
• Faecalibacterium_prausnitzii_SL3_3:character
• Bacteroides_cellulosilyticus_DSM_14838:character
• Bacteroides_stercoris_ATCC_43183:character
• Collinsella_aerofaciens_ATCC_25986:character
• Bacteroides_eggerthii_DSM_20697:character
• Bacteroides_vulgatus_ATCC_8482:character
• Roseburia_intestinalis_M50_1:character
• Bifidobacterium_longum_longum_CCUG_52486:character
• Eubacterium_siraeum_70_3:character
• Bacteroides_ovatus_ATCC_8483:character
• Eubacterium_ventriosum_ATCC_27560:character
• Parabacteroides_distasonis_ATCC_8503:character
• Bacteroides_xylanisolvens_XB1A:character
• Eubacterium_biforme_DSM_3989:character
• Eubacterium_rectale_M104_1:character
• Coprococcus_eutactus_ATCC_27759:character
• Coprococcus_comes_ATCC_27758:character
• Bacteroides_finegoldii_DSM_17565:character
• Ruminococcus_obeum_A2_162:character
• Parabacteroides_johnsonii_DSM_18315:character
• Bacteroides_dorei_5_1_36_D4:character
• Streptococcus_thermophilus_LMD_9:character
• Bacteroides_pectinophilus_ATCC_43243:character
• Clostridium_leptum_DSM_753:character
• Bacteroides_dorei_DSM_17855:character
• Catenibacterium_mitsuokai_DSM_15897:character
• Bacteroides_coprophilus_DSM_18228:character
• Bifidobacterium_bifidum_NCIMB_41171:character
• Clostridium_bolteae_ATCC_BAA_613:character
• Ruminococcus_gnavus_ATCC_29149:character
• Desulfovibrio_piger_ATCC_29098:character
• Bacteroides_fragilis_3_1_12:character
• Bifidobacterium_pseudocatenulatum_DSM_20438:character
• Clostridium_sp_M62_1:character
• Escherichia_coli_O157_H7_EC4115:character
• Bifidobacterium_catenulatum_DSM_16992:character
• Clostridium_bartlettii_DSM_16795:character
• Pseudoflavonifractor_capillosus_ATCC_29799:character
• Subdoligranulum_variabile_DSM_15176:character
• Clostridium_symbiosum_WAL_14163:character
• Mitsuokella_multacida_DSM_20544:character
• Clostridium_nexile_DSM_1787:character
• Methanobrevibacter_smithii_DSM_2375:character
• Anaerotruncus_colihominis_DSM_17241:character
• Megamonas_hypermegale_ART12_1:character
• Clostridium_spiroforme_DSM_1552:character
• Bifidobacterium_animalis_lactis_AD011:character
• Clostridium_asparagiforme_DSM_15981:character
• Clostridium_scindens_ATCC_35704:character
• Bifidobacterium_dentium_ATCC_27678:character
• Enterococcus_faecalis_TX0104:character
• Blautia_hydrogenotrophica_DSM_10507:character
• Bifidobacterium_angulatum_DSM_20098:character
• Streptococcus_gordonii_Challis_CH1:character
• Eubacterium_dolichum_DSM_3991:character
• Bifidobacterium_breve_DSM_20213:character
• Lactobacillus_acidophilus_NCFM:character
• Klebsiella_pneumoniae_342:character
• Lactobacillus_johnsonii_NCC_533:character
• Collinsella_stercoris_DSM_13279:character
• Anaerostipes_caccae_DSM_14662:character
• Streptococcus_sanguinis_SK36:character
• Streptococcus_infantarius_infantarius_ATCC_BAA_102:character
• Pediococcus_pentosaceus_ATCC_25745:character
• Haemophilus_influenzae_NTHi_86_028NP:character
• Collinsella_intestinalis_DSM_13280:character
• Actinomyces_odontolyticus_ATCC_17982:character
• Helicobacter_pullorum_MIT_98_5489:character
• Butyrivibrio_fibrisolvens_16_4:character
• Enterobacter_cancerogenus_ATCC_35316:character
• Lactobacillus_sakei_sakei_23K:character
• Lactobacillus_gasseri_ATCC_33323:character
• Fusobacterium_nucleatum_nucleatum_ATCC_25586:character
• Lactococcus_lactis_cremoris_MG1363:character
• Candidatus_Sulcia_muelleri_GWSS:character
• Clostridium_difficile_630:character
• Lactobacillus_fermentum_IFO_3956:character
• Clostridium_hylemonae_DSM_15053:character
• Methanosphaera_stadtmanae_DSM_3091:character
• Campylobacter_hominis_ATCC_BAA_381:character
• Porphyromonas_gingivalis_ATCC_33277:character
• Lactobacillus_casei_casei_BL23:character
• Clostridium_phytofermentans_ISDg:character
• Enterococcus_faecalis_TX1322:character
• Clostridium_perfringens_ATCC_13124:character
• Leuconostoc_mesenteroides_mesenteroides_ATCC_8293:character
• Lactobacillus_ultunensis_DSM_16047:character
• Citrobacter_koseri_ATCC_BAA_895:character
• Desulfovibrio_vulgaris_Miyazaki_F:character
• Proteus_mirabilis_HI4320:character
• Lactobacillus_helveticus_DPC_4571:character
• Anaerofustis_stercorihominis_DSM_17244:character
• Finegoldia_magna_ATCC_29328:character
• Campylobacter_concisus_13826:character
• Pseudomonas_aeruginosa_LESB58:character
• Bifidobacterium_gallicum_DSM_20093:character
• Lactobacillus_paracasei_ATCC_25302:character
• Cronobacter_sakazakii_ATCC_BAA_894:character
• Anaerococcus_hydrogenalis_DSM_7454:character
• Lactobacillus_hilgardii_ATCC_8290:character
• Proteus_penneri_ATCC_35198:character
• Staphylococcus_saprophyticus_saprophyticus_ATCC_15305:character