Relationship Matrices for Diploid and Autopolyploid Species
Construction of Relationship Matrix A
Construction of pedigree-based relationship matrix with parental guess...
Organizes pedigree data in a chronological way
Add new crosses to a current A matrix
Filter the pedigree to keep only the genealogy of a subset of individu...
Transform a matrix in 3 columns
Construction of Relationship Matrix G
Construction of Combined Relationship Matrix H
Check and filter markers
Survying on missing data
Computation of A (pedigree), G (genomic-base), and H (A corrected by G) relationship matrices for diploid and autopolyploid species. Several methods are implemented considering additive and non-additive models.