Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents
APIS for diploids
APIS for triploids
Assignment power
Import from Plink .ped
Import from .vcf
Shiny App for interactive session of APIS
Plot deltas
Plot mismatches
Plot probabilities
Simulate offspring
Parentage assignment package. Parentage assignment is performed based on observed average Mendelian transmission probability distributions or Exclusion. The main functions of this package are the function APIS_2n(), APIS_3n() and launch_APIShiny(), which perform parentage assignment.