Partition/Decomposition of Breeding Values by Paths of Information
AlphaPart.R
AlphaPartSubset.R
AlphaPartSum.R
Calculate parent average for base population.
Get scale information
Mapping levels
Report the Space Allocated for Objects
pedFixBirthYear.R
pedSetBase.R
A function to plot summary of partitioned breeding values.
Print method for the output of AlphaPart function.
Print a plot generate by the function plotSummaryAlphaPart
Print method for objects of the class summaryAlphaPart.
Save plot objects on the disk for permanent storage. Function `savePlo...
Save plot method for AlphaPart
Scale EBVs for objects of the class summaryAlphaPart.
A function to summarize AlphaPart object.
Change given unknown value to NA and vice versa.
write.csv.R
A software that implements a method for partitioning genetic trends to quantify the sources of genetic gain in breeding programmes. The partitioning method is described in Garcia-Cortes et al. (2008) <doi:10.1017/S175173110800205X>. The package includes the main function AlphaPart for partitioning breeding values and auxiliary functions for manipulating data and summarizing, visualizing, and saving results.