Annotate the Gene Symbols for Probes in Expression Array
Annotate gene IDs according to GTF files in gencode
Check a list of genes how they show difference.
Check whether the input gpl in our platform list or not
draw a heatmap for DEG result
draw a volcano for DEG result
Filter expression matrix based on annotation
Download expression dataset by GSE id
Get all GPL list in our package getGPLList returns all the GPL numbe...
Get Probe Annotation
Print GPL information
We curated 147 of expression array, from 3 species(human,mouse,rat), 3 companies('Affymetrix','Illumina','Agilent'), by aligning the 'Fasta' sequences of all probes of each platform to their corresponding reference genome, and then annotate them to genes.