Estimates Degrees of Relatedness (Up to the Second Degree) for Extreme Low-Coverage Data
callRelatedness
get column
Pipe operator
plotLOAF
plotSLICE
process Eigenstrat data
process Eigenstrat data - alternative version
read_ind
read_snp
saveSLICES
sim_geno
split line
test_degree
The goal of the package is to provide an easy-to-use method for estimating degrees of relatedness (up to the second degree) for extreme low-coverage data. The package also allows users to quantify and visualise the level of confidence in the estimated degrees of relatedness.
Useful links