Prediction of Anticancer Peptides
Prediction of anticancer peptides
CancerGram Graphical User Interface
Install CancerGramModel package containing model for ACP prediction
Convert predictions to data.frame Return predictions as data.frame
Predict anticancer peptides
Read sequences from .txt file
Predicts anticancer peptides using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI. The CancerGram model is too large for CRAN and it has to be downloaded separately from the repository: <https://github.com/BioGenies/CancerGramModel>. For more information see: Burdukiewicz et al. (2020) <doi:10.3390/pharmaceutics12111045>.