load_interaction_score_output function

[INTERNAL] Loads output of python script for interaction score calculation

[INTERNAL] Loads output of python script for interaction score calculation

[INTERNAL] Loads data generated by calculate_interaction_score. Python output files are graphs in gml format for each of both groups.

load_interaction_score_output(saving_path, graphB_null)

Arguments

  • saving_path: [string] Path to save intermediate output of DrDimont's functions. Default is current working directory. Directory to use for writing intermediate data when passing input and output between Python and R. Directory to load python output from
  • graphB_null: [bool] Specifying if graphB of groupB is given (FALSE) or not (TRUE). (default: FALSE)

Returns

A named list (elements groupA and groupB). Each element contains an iGraph object containing the interaction score as edge attribute.

  • Maintainer: Katharina Baum
  • License: MIT + file LICENSE
  • Last published: 2022-09-23

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