netgen_v1 function

netgen_v1

netgen function

netgen_v1(n_modav = c(50, 10), cutoffs = c(3, 0), net_type = 1,
  net_degree = 10, net_rewire = c(0.3, 0), mod_probs = c(0.2, 0.2,
  0.2, 0.2, 0.2, 0, 0), verbose = FALSE)

Arguments

• n_modav: network size and average module size (integer vector, length 2)
• cutoffs: module and submodule minimum sizes (integer vector, length 2). (submodules are used only for bipartite and tripartite networks)
• net_type: integer indicating type, see details
• net_degree: average degree of connection
• net_rewire: global and local network rewiring probabilities
• mod_probs: module probabilities for types 1 to 51, used for constructing mixed networks, net_type = 0
• verbose: logical, default TRUE. Should a message report summary statistics?

Returns

an igraph object

Details

network type

• 0 = mixed
• 1 = random
• 2 = scalefree
• 3 = nested
• 41 = bi-partite nested
• 42 = bi-partite random
• 51 = tri-trophic bipartite nested-random "ttbnr"
• 52 = tri-trophic bipartite nested-bipartite nested "ttbnbn"