Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
Continuous Time level information of an Epidemic
Generate binary adjacency matrix contact networks
Generate epidemics from distance-based and/or network-based continuous...
Markov Chain Monte Carlo-based tool for analyzing (SIR/SINR) distance-...
Calculates the log likelihood
Plot the contact network of contactnet object
S3 method to plot summary of epidemic.
Plot the output of epictmcmc object
Prints the contents of an epictmcmc object to the console
Summary method for epictmcmc objects
Provides tools for simulating from continuous-time individual level models of disease transmission, and carrying out infectious disease data analyses with the same models. The epidemic models considered are distance-based and/or contact network-based models within Susceptible-Infectious-Removed (SIR) or Susceptible-Infectious-Notified-Removed (SINR) compartmental frameworks. <doi:10.18637/jss.v098.i10>.