Variational Techniques in Epidemiology
apply_delay
EpiIndicators
EpiIndicators_params function to select EpiIndicators parameters
EpiIndicators_plot
EpiInvert estimates the reproduction number Rt and a restored incide...
EpiInvert_plot
EpiInvertForecast computes a 28-day forecast of the restored inciden...
EpiInvertForecast_plot
joint_indicators_by_date
select_params function to select EpiInvert parameters
Using variational techniques we address some epidemiological problems as the incidence curve decomposition by inverting the renewal equation as described in Alvarez et al. (2021) <doi:10.1073/pnas.2105112118> and Alvarez et al. (2022) <doi:10.3390/biology11040540> or the estimation of the functional relationship between epidemiological indicators. We also propose a learning method for the short time forecast of the trend incidence curve as described in Morel et al. (2022) <doi:10.1101/2022.11.05.22281904>.