An Interface Between the 'FSKX' Standard and 'R'
Checks that the files defined in the manifest exist
Recursively clean object by removing empty values
Clean empty values from JSON string
Fix the metadat so that it is lists
Creates an FSK model from an existing R script
Converts a dataframe to a list
Exports an object of FSK class as an .fskx file
Functions for exporting the manifest of an FSK2R object
Function for exporting the metadata of an FSK2R object
Functions for exporting the model metadata of an FSK2R object
Export other files
Functions for exporting the packages of an FSK2R object
Functions for exporting the R model of an FSK2R object
Functions for exporting the README of an FSK2R object
Export the model.sbml
Export the sim.sedml
Functions for exporting the visualization script of an FSK2R object
Functions for exporting the workspace of an FSK2R object
Extract script filenames from RDF metadata
Finds where packages are stored
Startup FSK runner
Author Information
Data Background Section
General Information Section
FSK Metadata Classes
Model Category Information
Model Math Section
Parameter Information
Reference Information
Scope Section
Returns the background of an FSK object
Returns the general info of an FSK object
Returns the model math of an FSK object
Readme of an FSK object
Returns the scope of an FSK object
Extract session information
Returns a summary of the simulations of an FSK object
Import of FSK with join node
Import an FSK model into R
Does the object have an R model?
Is it an instance of FSK2R?
Map for the contents of the metadata
Map between the names used in the template and the xml
From read_fsk_metadata_XX to FSK2R format
Number of simulations in the FSK2R object
Read the metadata.json file
Read the manifest of an FSK file and convert it to a data.frame
FSK metadata from local Excel file
Read the model.sbml
Read the packages.json
Read the metadata.rdf
Read the README file
Read the sim.sedml file
Read "other files"
Reads the R model in an FSK model
Reads the visualization script in an FSK model
Run every simulation in an FSK object
Run one simulation in an FSK object
Define a new simulation in an FSK2R object
Readme of an FSK object
Updates the manifest file
Functions for importing, creating, editing and exporting 'FSK' files <https://foodrisklabs.bfr.bund.de/fskx-food-safety-knowledge-exchange-format/> using the 'R' programming environment. Furthermore, it enables users to run simulations contained in the 'FSK' files and visualize the results.