defineNetwork function

Define a network providing its matrix of interactions and specifying the functions groups in row and col.

defineNetwork(mat, typeInter, rowFG, colFG)

Arguments

• mat: An adjacency matrix (symmetric or not) or an incidence matrix
• typeInter: Type of the matrix, choice between "inc" (incidence), "adj" (adjacency) and "diradj" (directed adjacency)
• rowFG: Name of the functional group in row
• colFG: Name of the function group in column

Returns

a list object formatted for the GREMLINS package

Examples

A <- matrix(rbinom(100,1,.2),10,10)
type <- "diradj"
defineNetwork(A,"diradj","FG1","FG1")