Intrinsic Peak Analysis (IPA) for HRMS Data
Aligned Peak Property Table Correlation List Calculator
analyte retention time corrector
Chromatography analysis
peak detection
Numerical differentiation by five-point stencil method
Gap-Filling Core Function
aggregation method for the IDSL.IPA modules
Develop a baseline for the chromatogram using local minima
Compound-centric peak annotation
IPA GapFiller
IPA Ion Pairing
IPA_logRecorder
IPA message
MS deconvoluter
IPA peak alignment folder xlsxAnalyzer
IPA peak alignment
IPA Peak Analyzer
IPA Peaklist Annotation
spectraList filtering
IPA Targeted Analysis
IPA Targeted xlsxAnalyzer
IPA Workflow
IPA xlsx Analyzer
islocalminimum
islocaloptimum
loadRdata
m/z clustering raw XIC
m/z - RT Indexer
Peak Alignment Core
peak area
Asymmetry factor for a chromatographic peak
Peak Derivative Skewness Calculator
Fronting and tailing peaks resolver
Peak Gaussianity Calculator
Peak Property Table Frequency Calculator
Peak Property Table Median Calculator
Peak Pseudomoments Symmetry Calculator
Peak Sharpness Calculator
Peak USP Tailing Factor Calculator
peak width measuement
Peak table producer
PeakXcol Flagger
plot_mz_eic
plot_simple_tic
Primary peak analyzer
recursive mass correction
Reference retention time detector
SNR baseline
SNR RMS
SNR xcms
Targeted Ion Pairing
XIC
A multi-layered untargeted pipeline for high-throughput LC/HRMS data processing to extract signals of organic small molecules. The package performs ion pairing, peak detection, peak table alignment, retention time correction, aligned peak table gap filling, peak annotation and visualization of extracted ion chromatograms (EICs) and total ion chromatograms (TICs). The 'IDSL.IPA' package was introduced in <doi:10.1021/acs.jproteome.2c00120> .