Assessment of Individual Identity in Animal Signals
Calculate total distance in given dataset
Calculate average within individual distance
Calculates discrimination score (DS)
Calculate F-values for individual identity traits
Calculate information capacity (HM)
Calculate Beecher's information statistic (HS, variant = HSnpergroup)
Calculate Beecher's information statistic (HS, variant = HSngroups)
Calculate Beecher's information statistic (HS, variant = HSnpergroup)
Calculate Beecher's information statistic (HS, variant = HSntot)
Calculate Beecher's information statistic (HS, variant = HSvarcomp)
Calculate the centroid of the individual identity traits
Calculate Mutual information (MI)
Convert raw trait variables into principal components
Calculates potential of identity coding (PIC, variant=PICbetweentot)
Calculates potential of identity coding (PIC, variant=PICbetweenmeans)
Calculates potential of identity coding (PIC, variant=PICbetweentot)
Convert DS to HS
Convert HS to DS
Generate dataset with multiple individual identity traits
Generate dataset with a single individual identity trait
IDmeasurer: A package for calculation of individual identity metrics i...
Provides tools for assessment and quantification of individual identity information in animal signals. This package accompanies a research article by Linhart et al. (2019) <doi:10.1101/546143>: "Measuring individual identity information in animal signals: Overview and performance of available identity metrics".