Linear Predictor Score, for Binary Inference from Multiple Continuous Variables
Hierarchical clustering heat maps
Enhanced heat map ploting
Heatmap palette generation
Plots a heat map color scale, for legend
Linear Predictor Score coefficient computation
Linear Predictor Score fitting
Overlap quantification for LPS object
Plot method for LPS objects
Predict method for LPS objects
Produces visual representation of survival data
Plots a survival color scale, for legend
An implementation of the Linear Predictor Score approach, as initiated by Radmacher et al. (J Comput Biol 2001) and enhanced by Wright et al. (PNAS 2003) for gene expression signatures. Several tools for unsupervised clustering of gene expression data are also provided.