Exact Spike Train Inference via L0 Optimization
Cross-validate and optimize model parameters
Estimate spike train, underlying calcium concentration, and changepoin...
LZeroSpikeInference: LZeroSpikeInference: A package for estimating spi...
Plot mean squared error vs. tuning parameter from the cross-validation...
Plot the solution to an L0 segmentation problem
Plot simulated data
Print CV results
Print estimated spikes
Print simulated data
Simulate fluorescence trace based on simple AR(1) generative model
An implementation of algorithms described in Jewell and Witten (2017) <arXiv:1703.08644>.