Automatically Fetching References Metadata from Literature Databases
Automating the retrieval of references based on a saved search string(...
Creates a unique name for any document.
Creates an excel file to store the deduplication history.
Creates an excel file to store the references identification retrieved...
Creates and saves search string(s).
Creates an excel file to store the history of searches made using `cre...
Deduplicates the references from up to three dataframes.
Extracts the metadata from the new references found on PubMed based on...
Extracts the metadata from the new references found on Scopus based on...
extract the metadata from the new references from Web of Science based...
Transforms a long computer path into a shorter.
Manual literature retrieval.
Removes a scheduled task.
Saves Web of Science and/or Scopus API keys in .Renviron.
Provides functions to automatically retrieve and deduplicate reference metadata based on saved search strings. Access to Web of Science and Scopus requires personal API keys, while PubMed can be queried without one. The optional deduplication functionality requires the package 'ASySD' available from <https://github.com/camaradesuk/ASySD>.