translate_aminoacids function

Function to translate between canonical and GROMOS amino acid abbreviations

Converts an aminoacid naming scheme in the context of GROMOS (e.g. containing HISH) into canonical three- or one-letter codes.

translate_aminoacids( input,
                      switchMode )

Arguments

• input: Vector of GROMOS abbreviations.
• switchMode: Type "1" results in single-letter, type "2" in three-letter code.

Examples

translate_aminoacids( c( "ALA", "HISA", "SER" ),
                      switchMode = 2 )

Author(s)

Christian Margreitter