Microbe-Metabolite Interactions-Based Metabolic Profiles Predictor
Check if input data satisfies input conditions
Compare features' abundance obtained by prediction and measurement.
Filter features of input table according to prevalence and/or abundanc...
Estimate components for O2-PLS method
get components number from Cross-validate procedure of O2PLS
Predict metabolites from new microbiome samples using MMINP model.
Data Preprocessing function for MMINP
Train MMINP model using paired microbial features and metabolites data
Print function for MMINP.train
Implements a computational framework to predict microbial community-based metabolic profiles with 'O2PLS' model. It provides procedures of model training and prediction. Paired microbiome and metabolome data are needed for modeling, and the trained model can be applied to predict metabolites of analogous environments using new microbial feature abundances.