Quantification of Mitochondrial DNA Heteroplasmy
detect_insertion
dpt_test
filter_bases
get_distribution
get_heteroplasmy
plot_correlation_bases
plot_distance_matrix
plot_distribution
plot_dpt
plot_genome_coverage
plot_heatmap
plot_heteroplasmy
plot_heteroplasmy_variability
plot_spider_chart
choose_features_clustering
clustering_angular_distance
plot_coordinate_heteroplasmy
get_raw_counts_allele
get_wilcox_test
plot_allele_frequency
plot_base_coverage
plot_batch
plot_cells_coverage
plot_condition
plot_coordinate_cluster
vi_comparison We compute the variation of information (VI) between the...
Allows the estimation and downstream statistical analysis of the mitochondrial DNA Heteroplasmy calculated from single-cell datasets <https://github.com/ScialdoneLab/MitoHEAR/tree/master>.