MixTwice2.0 package

Large-Scale Hypothesis Testing by Variance Mixing

Implements large-scale hypothesis testing by variance mixing. It takes two statistics per testing unit -- an estimated effect and its associated squared standard error -- and fits a nonparametric, shape-constrained mixture separately on two latent parameters. It reports local false discovery rates (lfdr) and local false sign rates (lfsr). Manuscript describing algorithm of MixTwice: Zheng et al(2021) <doi: 10.1093/bioinformatics/btab162>.

  • Maintainer: Zihao Zheng
  • License: GPL-2
  • Last published: 2022-03-02