Negative Binomial Models for RNA-Sequencing Data
Fit a parametric disperison model to thinned counts
Estimate Negative Binomial Dispersion
Estiamte Normalization Factors
Exact Negative Binomial Test for Differential Gene Expression
Estimate the regression coefficients in an NB GLM model
Fit Negative Binomial Regression Model and Test for a Regression Coeff...
NBP Test for Differential Gene Expression from RNA-Seq Counts
Negative Binomial Regression Models for Statistical Analysis of RNA-Se...
Boxplot and scatterplot matrix of relative frequencies (after normaliz...
Plot the estimated dispersion as a function of the preliminarily estim...
Diagnostic Plots for an NBP Object
Prepare the NB Data Structure for RNA-Seq Read Counts
Prepare the Data Structure for Exact NB test for Two-Group Comparison
Print summary of the nb counts
Print the estimated dispersion model
Print output from test.coefficient
Print summary of an NBP Object
Large-sample Test for a Regression Coefficient in an Negative Binomial...
Negative Binomial (NB) models for two-group comparisons and regression inferences from RNA-Sequencing Data.