likeOxBS function

Likelihood function for C/5mC/5hmC likelihood estimator

likeOxBS(theta, betaBS, betaOxBS, signalBS, signalOxBS)

Arguments

• theta: 2-element parameter vector
• betaBS: beta value from conventional bisulfite conversion
• betaOxBS: beta value from oxy-bisulfite conversion
• signalBS: total signal from conventional bisulfite conversion
• signalOxBS: total signal from oxy-bisulfite conversion

Details

Likelihood function for C/5mC/5hmC likelihood estimator; used for maximum likelihood estimation, not typically called by user.

Returns

likelihood for C/5mC/5hmC likelihood

Author(s)

E. Andres Houseman

See Also

fitOneOxBS