Group Regression Models for Risk Protein Complex Identification
Cross-validation for PCLasso
Cross-validation for PCLasso2
get protein complexes
Protein complex-based group lasso-Cox model
Protein complex-based group Lasso-logistic model
tools:::Rd_package_title("PCLassoReg")
Plot the cross-validation curve from a cv.PCLasso object
Plot the cross-validation curve from a cv.PCLasso2 object
Plot coefficients from a PCLasso object
Plot coefficients from a PCLasso2 object
Make predictions from a cross-validated PCLasso model
Make predictions from a cross-validated PCLasso2 model
Make predictions from a PCLasso model
Make predictions from a PCLasso2 model
Two protein complex-based group regression models (PCLasso and PCLasso2) for risk protein complex identification. PCLasso is a prognostic model that identifies risk protein complexes associated with survival. PCLasso2 is a classification model that identifies risk protein complexes associated with classes. For more information, see Wang and Liu (2021) <doi:10.1093/bib/bbab212>.