Functions for Phylogenetically Based Statistical Analyses
Canonical Correlation Analysis from Simulated Data Sets
Correlation Through the Origin
Independet contrasts for Garland & Janis data set
Garland & Janis's 1993 data on mammalian running speed and limb length
Phylogenetic variance-covariance matrix for Garland & Janis (1993).
Helper functions
Independet contrasts for Bauwens and Diaz-Uriarte (1997) lacertid data...
Bauwens and Diaz-Uriarte (1997) lacertid data
Variance-covariance matrix for lacertids from Bauwens and Diaz-uriarte...
Linear Models from Simulated Data Sets
Produce the Matrix D of Garland and Ives (2000) for GLS
Phylogenetically-Based GLS Model Fitting
Plot a phylog.cancor object
Plot a phylog.lm object
Plot a phylog.prcomp object
Principal Components Analysis from Simulated Data Sets
Printing summaries of PHYLOGR statistical functions
Read Inp Data Files
Read Pdi Data Files
Read Phylip Infile Data Files
Read a Phylogenetic Covariance Matrix
Read Sim Files From PDSIMUL
A simulated data set
Summarize a phylog.cancor object
Summarize a phylog.lm object
Summarize a phylog.prcomp object
Manipulation and analysis of phylogenetically simulated data sets and phylogenetically based analyses using GLS.