Functions for Phylogenetically Based Statistical Analyses
Helper functions
Linear Models from Simulated Data Sets
Produce the Matrix D of Garland and Ives (2000) for GLS
Canonical Correlation Analysis from Simulated Data Sets
Correlation Through the Origin
Phylogenetically-Based GLS Model Fitting
Plot a phylog.cancor object
Plot a phylog.lm object
Plot a phylog.prcomp object
Principal Components Analysis from Simulated Data Sets
Printing summaries of PHYLOGR statistical functions
Read Inp Data Files
Read Pdi Data Files
Read Phylip Infile Data Files
Read a Phylogenetic Covariance Matrix
Read Sim Files From PDSIMUL
Summarize a phylog.cancor object
Summarize a phylog.lm object
Summarize a phylog.prcomp object
Manipulation and analysis of phylogenetically simulated data sets and phylogenetically based analyses using GLS.