Identify Characteristics of Patients in the OMOP Common Data Model
Compute the age of the individuals at a certain date
Query to add the age of the individuals at a certain date
Categorize a numeric variable
Add cdm name
It creates columns to indicate number of occurrences of intersection w...
Date of cohorts that are present in a certain window
It creates columns to indicate the number of days between the current ...
It creates columns to indicate the presence of cohorts
Add cohort name for each cohort_definition_id
It creates column to indicate the count overlap information between a ...
It creates column to indicate the date overlap information between a t...
It creates column to indicate the days of difference from an index dat...
It creates column to indicate the flag overlap information between a t...
Add a column with the individual birth date
Query to add a column with the individual birth date
Add date of death for individuals. Only death within the same observat...
Add days to death for individuals. Only death within the same observat...
Add flag for death for individuals. Only death within the same observa...
Compute demographic characteristics at a certain date
Query to add demographic characteristics at a certain date
Compute the number of days till the end of the observation period at a...
Query to add the number of days till the end of the observation period...
Indicate if a certain record is within the observation period
Query to add a new column to indicate if a certain record is within th...
Add the ordinal number of the observation period associated that a giv...
Add the ordinal number of the observation period associated that a giv...
Compute the number of days of prior observation in the current observa...
Query to add the number of days of prior observation in the current ob...
Compute the sex of the individuals
Query to add the sex of the individuals
Compute number of intersect with an omop table.
Compute date of intersect with an omop table.
Compute time to intersect with an omop table.
Intersecting the cohort with columns of an OMOP table of user's choice...
Compute a flag intersect with an omop table.
Show the available estimates that can be used for the different variab...
Get the name of the end date column for a certain table in the cdm
Function to disconnect from the mock
It creates a mock database for testing PatientProfiles package
PatientProfiles: Identify Characteristics of Patients in the OMOP Comm...
Objects exported from other packages
Get the name of the source concept_id column for a certain table in th...
Get the name of the standard concept_id column for a certain table in ...
Get the name of the start date column for a certain table in the cdm
Summarise variables using a set of estimate functions. The output will...
Classify the variables between 5 types: "numeric", "categorical", "bin...
Identify the characteristics of patients in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model.
Useful links