RCNA_object-class function

RCNA.object definition

An S4 class used to specify parameters for an analysis run class

Slots

• sample.names: Required. Character vector containing names of subjects
• ano.file: Required. Character single file path detailing a feature-wise annotation file
• out.dir: Required. Character vector containing the name of each subject?s output directory
• gcParams: Data Frame storing all run parameters for the correct_gc_bias function
• nkrParams: Data Frame storing all run parameters for the estimate_nkr function
• scoreParams: Data Frame storing all run parameters for the estimate_feature_score function
• commands: RCNA_analysis object storing commands and parameters from previous function runs on this object

See Also

run_RCNA

RCNA_analysis,