PhenotypicOU-class function

Class "PhenotypicOU"

A subclass of the PhenotypicModel class, intended to represent the Ornstein-Uhlenbeck model of phenotypic evolution. 1.1

class

Objects from the Class

Objects can be created by calls of the form new("PhenotypicOU", ...).

Slots

• matrixCoalescenceTimes:: Object of class "matrix" ~~
• name:: Object of class "character" ~~
• period:: Object of class "numeric" ~~
• aAGamma:: Object of class "function" ~~
• numbersCopy:: Object of class "numeric" ~~
• numbersPaste:: Object of class "numeric" ~~
• initialCondition:: Object of class "function" ~~
• paramsNames:: Object of class "character" ~~
• constraints:: Object of class "function" ~~
• params0:: Object of class "numeric" ~~
• tipLabels:: Object of class "character" ~~
• tipLabelsSimu:: Object of class "character" ~~
• comment:: Object of class "character" ~~

Extends

Class "PhenotypicModel", directly.

Methods

• getTipDistribution: signature(object = "PhenotypicOU"): ...

References

Manceau M., Lambert A., Morlon H. (2017) A unifying comparative phylogenetic framework including traits coevolving across interacting lineages Systematic Biology, and the associated Supplementary material.

Author(s)

Marc Manceau

Examples

showClass("PhenotypicOU")