PhenotypicPM-class function

Class "PhenotypicPM"

A subclass of the PhenotypicModel class, intended to represent the Phenotypic Matching model of phenotypic evolution, by Nuismer and Harmon (Eco Lett, 2014). 1.1

class

Objects from the Class

Objects can be created by calls of the form new("PhenotypicPM", ...).

Slots

• name:: Object of class "character" ~~
• period:: Object of class "numeric" ~~
• aAGamma:: Object of class "function" ~~
• numbersCopy:: Object of class "numeric" ~~
• numbersPaste:: Object of class "numeric" ~~
• initialCondition:: Object of class "function" ~~
• paramsNames:: Object of class "character" ~~
• constraints:: Object of class "function" ~~
• params0:: Object of class "numeric" ~~
• tipLabels:: Object of class "character" ~~
• tipLabelsSimu:: Object of class "character" ~~
• comment:: Object of class "character" ~~

Extends

Class "PhenotypicModel", directly.

Methods

• getTipDistribution: signature(object = "PhenotypicPM"): ...

References

Manceau M., Lambert A., Morlon H. (2017) A unifying comparative phylogenetic framework including traits coevolving across interacting lineages Systematic Biology, and the associated Supplementary material.

Author(s)

Marc Manceau

Examples

showClass("PhenotypicPM")