plotdiffgenes function

Barplot of differentially expressed genes

This functions produces a barplot of differentially expressed genes derived by the function diffgenes

plotdiffgenes(z, gene)

Arguments

• z: Output of diffgenes
• gene: Valid gene name. Has to correspond to one of the rownames of the ndata slot of the SCseq object.

Returns

None

Examples

sc <- SCseq(intestinalDataSmall)
sc <- filterdata(sc)
sc <- compdist(sc)
sc <- clustexp(sc)
sc <- findoutliers(sc)
x <- diffgenes(sc,1,2)
head(x$z)
plotdiffgenes(x,names(x$z)[1])