Rfast2.1.5.2 package

MLE of (hyper-)spherical distributions

Insert/remove function names in/from the NAMESPACE file

Simple linear regressions coefficients

Matrix with all pairs of t-tests

Analysis of covariance

Many ANCOVAs

Significance testing for the coefficients of Quasi binomial or the qua...

ANOVA for two quasi Poisson regression models

Apply to each column a method under condition

Estimation of an AR(1) model

Convert R function to the Rfast's coresponding

Estimation of the Box-Cox transformation

MLE of distributions defined in the (0, 1) interval

BIC (using partial correlation) forward regression

BIC forward regression with generalised linear models

Binary search algorithm

Bootstrap t-test for 2 independent samples

Backward selection regression

Fitted probabilities of the Terry-Bradley model

Many one sample goodness of fit tests for categorical data

Search for variables with zero range in a matrix

Check Namespace and Rd files

Cholesky decomposition of a square matrix

Circular-linear correlation

Coefficient matrices

Column-wise Yule's Y (coefficient of colligation)

Many Welch's F-tests

Column and row-wise Any

Many area under the curve values

Colum-wise cumulative operations (sum, prod, min, max)

Column and row wise coefficients of variation

Column-wise differences

Column-wise kurtosis and skewness coefficients

Column and row-wise means of a matrix

Column-wise minimum and maximum of a matrix

Column-wise MLE of some univariate distributions

Many tests for the dispersion parameter in Poisson distribution

Many ANOVAS for count data with Poisson or quasi Poisson models

Column and row-wise products

Column and row-wise range of values of a matrix

Many random intercepts LMMs for balanced data with a single identical ...

Check if any column or row is fill with values

Column and row-wise Shuffle

Column and row-wise sums of a matrix

Column and row-wise tabulate

Column-wise true/false value of a matrix

Get specific columns/rows fo a matrix

Many moment and maximum likelihood estimations of variance components

Column and row-wise variances and standard deviations of a matrix

Column-wise uniformity tests for circular data

All k possible combinations from n elements

FBED variable selection method using the correlation

Correlation based forward regression

Correlation between pairs of variables

Correlation between a vector and a set of variables

Row - Wise matrix/vector count the frequency of a value

Fast covariance and correlation matrix calculation

Cox confidence interval for the ratio of two Poisson variables

Convert a dataframe to matrix

Hypothesis test for the distance correlation

Distance variance, covariance and correlation

Design Matrix

Diagonal Matrix

Fitting a Dirichlet distribution via Newton-Rapshon

Cross-Validation for the k-NN algorithm using the arc cosinus distance

k-NN algorithm using the arc cosinus distance

Distance matrix - Sum of all pairwise distances in a distance matrix

Distance between vectors and a matrix - Sum of all pairwise distances ...

Density of the multivariate normal and t distributions

Energy distance between matrices

Empirical and exponential empirical likelihood tests for one sample

Empirical and exponential empirical likelihood tests for two samples

Limited number of eigenvalues and eigenvectors of a symmetric matrix

Deep copy

Exact t-test for 2 independent samples

Many exponential regressions

Hypothesis test for von Mises-Fisher distribution over Kent distributi...

Floyd-Warshall algorithm for shortest paths in a directed graph

Minimum and maximum frequencies of a vector

Variable selection in generalised linear regression models with forwar...

Multi-sample tests for vectors

Many multi-sample tests

Matrix with G-square tests of indepdence

G-square test of conditional indepdence

Many G-square tests of indepedence

MLE of continuous univariate distributions defined on the positive lin...

Gamma regression with a log-link

Naive Bayes classifiers

Prediction with some naive Bayes classifiers

Chi-square and G-square tests of (unconditional) indepdence

Many simple geometric regressions

One and many Gini coefficients

Logistic and Poisson regression models

Some summary statistics of a vector for each level of a grouping varia...

Find the given value in a hash table

Hash - Pair function

Hash object

Hash object to a list object

Eigenvalues in high dimensional principal component analysis

MLE of the inverted Dirichlet distribution

Inverese Gaussian regression with a log-link

Find element

Check if values are integers and convert to integer

Check whether a square matrix is symmetric

Iterator

James multivariate version of the t-test

Cross-Validation for the k-NN algorithm

k nearest neighbours algorithm (k-NN)

Many multi-sample tests

Uniformity tests for circular data

Natural logarithm of the beta function

Binomial coefficient and its logarithm

Natural logarithm of the gamma function and its derivatives

Many F-tests with really huge matrices

Linear models for large scale data

Natural Logarithm each element of a matrix

Many univariate simple binary logistic regressions

Logistic or Poisson regression with a single categorical predictor

Lower and Upper triangular of a matrix

Column and row-wise mean absolute deviations

Mahalanobis distance

Number of equal columns between two matrices

Matrix multiplication, Cross and Tcross product

Column-wise matching coefficients

Match

Generates random values from a normal and puts them in a matrix

Column and row-wise medians of a matrix or median of a vector

Fast calculation of the spherical and hyperspherical median

Minimum and maximum of a vector

MLE for multivariate discrete data

Multinomial regression

Many simple multinomial regressions

Exponential empirical likelihood for a one sample mean vector hypothes...

Exponential empirical likelihood hypothesis testing for two mean vecto...

Many multivariate simple linear regressions coefficients

Multivariate kurtosis

MLE of the multivariate (log-) normal distribution

MLE of the multivariate t distribution

Apply method to Positive and Negative number

Norm of a matrix

MLE of continuous univariate distributions defined on the real line

Gaussian regression with a log-link

Many simple regressions for positive valued data

Column and row-wise nth smallest value of a matrix/vector

Odds ratio and relative risk

Many odds ratio tests

Orthogonal matching pursuit variable selection

Column and row-wise Order - Sort Indices

MLE of the ordinal model without covariates

Outer function

The skeleton of a Bayesian network produced by the PC algorithm

Partial distance correlation

Hypothesis test for two means of percentages

Many hypothesis tests for two means of percentages

Permutation based p-value for the Pearson correlation coefficient

Permutation

Minima and maxima of two vectors/matrices and Column-row wise minima a...

Tests for the dispersion parameter in Poisson distribution

Analysis of variance with a count variable

Many analysis of variance tests with a discrete variable

Polyserial correlation

Pooled covariance matrix

Quasi binomial regression for proportions

Many 2 sample proportions tests

Quasi Poisson regression

Many univariate simple poisson regressions

Angular central Gaussian random values simulation

Column and row-wise ranks

Simulating from a Bingham distribution

Simulation of random values from a Bingham distribution with any symme...

Reading the files of a directory

Many univariate simple linear regressions

Replicate columns/rows

utils::packageDescription("Rfast")[["Title"]]

Random intercepts linear mixed models

Many simple linear mixed model regressions

Repeated measures anova

Many regression based tests for single sample repeated measures

High dimensional MCD based detection of outliers

Multivariate Laplace random values simulation

Multivariate normal and t random values simulation

Simulation of random values from a normal distribution

Round each element of a matrix/vector

Row-wise minimum and maximum of a matrix

Row-wise true value of a matrix

Random values simulation from a von Mises-Fisher distribution

Random values simulation from a von Mises distribution

Many score based regressions

Many Shapiro-Francia normality tests

Skewness and kurtosis coefficients

Hypothesis testing between two skewness or kurtosis coefficients

Sorting of the columns-rows of a matrix

Sort and unique

Sort - Integer Sort - Sort a vector coresponding to another

Source many R files

Spatial median for Euclidean data

Spatial median regression

Inverse of a symmetric positive definite matrix

Circular or angular regression(s)

Vector allocation in a symmetric matrix

Spatial sign covariance matrix

Represantation of Stack

Standardisation

Sub-matrix

Table Creation - Frequency of each value

MLE of the tobit model

Topological sort of a DAG

Transpose of a matrix

Many one sample tests

One sample t-test for a vector

Many 2 sample tests tests

Many two-way ANOVAs

Fast and general represantation of a factor variable

Many univariate generalised linear regressions

Variance (and standard deviation) of a vector

Moment and maximum likelihood estimation of variance components

MLE of some circular distributions

Weibull regression model

Index of the columns of a data.frame which are a specific type

Operations between two matrices or matrix and vector

Yule's Y (coefficient of colligation)

MLE of count data