Similarity Identification in Gene Expression
BubbleSort is a function for calculating bubble sort correlation betwe...
EventRenaming is a function for changing annotation of censored sample...
ExpPhen_Matching is a function for matching samples between expression...
ExpPhen_Subdividing is a function for grouping samples based on a clin...
ExpPheno_Categorize is a function for grouping samples based on their ...
GeneMatching is a function to remove uncommon genes between a list of ...
Genes_SimCal is a function to calculate similarity between a set of sa...
GSVA_Calculation is a function for Calculating correlation between exp...
Pathway_Grouping is a function to make a pathway list from files conta...
Pathway_similarity is a function for calculating correlation between e...
SIGN_Aggregate is a function to reshape the list of pathway scoring, t...
SIGN_Ensemble_SimCal is a function for Generating list fo similarities...
Similarities_Wrapper is wrapper to identify similarities between the e...
SimSummary_2Class is a function to calculating similarity between two ...
Survival_Stats is a function for building cox model using all the feat...
SurvivalStat_PostProcess is a function to Extract summary statistics o...
TSC is a function to calculate transcriprtional similarity coefficient...
Provides a classification framework to use expression patterns of pathways as features to identify similarity between biological samples. It provides a new measure for quantifying similarity between expression patterns of pathways.