build.edgelist function

For a sample, produce the transmission tree as a igraph object

build.edgelist(generator, sample)

Arguments

• generator: A list of class tt.generator produced by tt.generator.
• sample: A list of class tt produced by sample.tt or sample.partial.tt

Returns

An igraph object

Examples

generator <- tt.generator(stratus.example.tree)
samples <- sample.tt(generator, 1)
build.edgelist(generator, samples[[1]])