AverageCounts function

Average Counts

Compute the mean counts per group of cells for a given assay

AverageCounts(object, assay = NULL, group.by = NULL, verbose = TRUE)

Arguments

• object: A Seurat object
• assay: Name of assay to use. Default is the active assay
• group.by: Grouping variable to use. Default is the active identities
• verbose: Display messages

Returns

Returns a dataframe

Examples

AverageCounts(atac_small)