FractionCountsInRegion function

Fraction of counts in a genomic region

Find the fraction of counts per cell that overlap a given set of genomic ranges

FractionCountsInRegion(object, regions, assay = NULL, ...)

Arguments

• object: A Seurat object
• regions: A GRanges object containing a set of genomic regions
• assay: Name of assay to use
• ...: Additional arguments passed to CountsInRegion

Returns

Returns a numeric vector

Examples

## Not run:

FractionCountsInRegion(
  object = atac_small,
  assay = 'bins',
  regions = blacklist_hg19
)
## End(Not run)