Links function

Get or set links information

Get or set the genomic link information for a Seurat object or ChromatinAssay

Links(object, ...)

Links(object, ...) <- value

## S3 method for class 'ChromatinAssay'
Links(object, ...)

## S3 method for class 'Seurat'
Links(object, ...)

## S3 replacement method for class 'ChromatinAssay'
Links(object, ...) <- value

## S3 replacement method for class 'Seurat'
Links(object, ...) <- value

Arguments

• object: A Seurat object
• ...: Arguments passed to other methods
• value: A GRanges object

Examples

Links(atac_small[["peaks"]])
Links(atac_small)
links <- Links(atac_small)
Links(atac_small[["peaks"]]) <- links
links <- Links(atac_small)
Links(atac_small) <- links