StringToGRanges function

String to GRanges

Convert a genomic coordinate string to a GRanges object

StringToGRanges(regions, sep = c("-", "-"), ...)

Arguments

• regions: Vector of genomic region strings
• sep: Vector of separators to use for genomic string. First element is used to separate chromosome and coordinates, second separator is used to separate start and end coordinates.
• ...: Additional arguments passed to makeGRangesFromDataFrame

Returns

Returns a GRanges object

Examples

regions <- c('chr1-1-10', 'chr2-12-3121')
StringToGRanges(regions = regions)