TBRDist1.0.2 package

Rearrangement Distances Between Unrooted Phylogenetic Trees

dot-PrepareTrees

Prepare trees for passing to uspr

internals

Internal functions

TreeRearrangementDistances

Calculate SPR, TBR and Replug distances on unrooted trees

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Fast calculation of the Subtree Prune and Regraft (SPR), Tree Bisection and Reconnection (TBR) and Replug distances between unrooted trees, using the algorithms of Whidden and Matsen (2017) <arxiv:1511.07529>.

  • Maintainer: Martin R. Smith
  • License: GPL (>= 3)
  • Last published: 2020-09-17

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