UniprotR2.5.1 package

Retrieving Information of Proteins from Uniprot

Enrichment.REAC

Connect and parse UniProt information

Get.diseases

Connect and parse UniProt information.

GetAccessionList

Connect and parse UniProt information.

GetExpression

Connect and parse UniProt Expression information.

GetFamily_Domains

Connect and parse UniProt Family Domains information.

GetGeneral_Information

Connect and parse UniProt General Information.

GetMiscellaneous

Connect and parse UniProt Miscellaneous information.

GetNamesTaxa

Connect and parse UniProt Names Taxa information.

GetPathology_Biotech

Connect and parse UniProt Pathology_Biotech information.

GetpdbStructure

Connect and parse UniProt information.

GetProteinAnnontate

Connect and parse UniProt information.

GetProteinFunction

Connect and parse UniProt Protein Function information.

GetProteinGOInfo

Connect and parse UniProt proteins gene ontology information.

GetProteinInteractions

Connect and parse UniProt protein Interactions information.

GetproteinNetwork_all

Connect and parse stringdb information.

GetproteinNetwork

Connect and parse stringdb information.

GetProteomeFasta

Connect and DOWNLOAD Proteome info.

GetProteomeInfo

Connect and DOWNLOAD Proteome info.

GetPTM_Processing

Connect and parse UniProt PTM_Processsing information.

GetPublication

Connect and parse UniProt Publication about a protein information.

GETSeqFastaUniprot

Connect and parse UniProt information.

GetSeqLength

Connect and parse UniProt Sequences information.

GetSequenceIso

Connect and parse UniProt Sequences information.

GetSequences

Connect and parse UniProt Sequences information.

GetStructureInfo

Connect and parse UniProt protein Structure information.

GetSubcellular_location

Connect and parse UniProt protein Subcellular location information.

Goparse

Connect and parse UniProt information.

HandleBadRequests

Handle bad requests This Function is used to handle possible errors wh...

Pathway.Enr

Connect and parse UniProt information

Plot.GOMolecular

Connect and parse UniProt information.

Plot.GOSubCellular

Connect and parse UniProt information.

PlotAcidity

Connect and parse UniProt information.

PlotCharge

Connect and parse UniProt information.

PlotChromosomeInfo

Connect and parse UniProt information.

PlotGenesNetwork

Connect and parse UniProt information.

PlotGOAll

Connect and parse UniProt information.

plotGoannotation

Connect and parse UniProt information.

PlotGOBiological

Connect and parse UniProt information.

PlotGoInfo

Connect and parse UniProt information.

PlotGoterms

Connect and parse UniProt information.

PlotGravy

Connect and parse UniProt information.

PlotPhysicochemical

Connect and parse UniProt information.

PlotproteinExist

Connect and parse UniProt information.

PlotProteinGO_bio

Connect and parse UniProt information.

PlotProteinGO_cel

Connect and parse UniProt information.

PlotProteinGO_molc

Connect and parse UniProt information.

PlotproteinStatus

Connect and parse UniProt information.

PlotProteinTaxa

Connect and parse UniProt information.

ProcessAcc

Connect and parse UniProt information.

Enrichment.KEGG

Connect and parse UniProt information

Enrichment.MF

Connect and parse UniProt information

ConstructGenesTree

Connect and parse UniProt information.

ConstructLocTree

Connect and parse UniProt information.

ConvertID

Connect and parse UniProt database identifiers information.

Enrichment.BP

Connect and parse UniProt information

Enrichment.CC

Connect and parse UniProt information

Connect to Uniprot <https://www.uniprot.org/> to retrieve information about proteins using their accession number such information could be name or taxonomy information, For detailed information kindly read the publication <doi:10.1016/j.jprot.2019.103613>.

  • Maintainer: Mohamed Soudy
  • License: GPL-3
  • Last published: 2025-11-08