Peptide Array Analysis Tools
Position Independent Amino Acid Distributions
Positional Amino Acid Composition Calculations
Calculate Peptide Length and Charge Attributes
Average duplicated peptides from a VDAP dataset
Peptide generator based on the output of functions vComp or vMotif
Signal Based Hits Selection for VDAP
Peptide Dissociation Rate Constant (Kd) Calculations
Signal or Kd Distributions separated by Length/Charge attributes
Quality Control of Peptides Based on Reproducibility and Kd
Subsetting for VDAP function QCKd
Select Peptides with the Specified Amino Acid Residue(s) at an Indicat...
Amino Acid Disbutions by Position at Various Length/Charge
Length/Charge/Kd Peptide Calculations and File Assembly
Generate Signal Weighted Amino Acid Heat Maps by Position
Select Peptides of a Particular Length/Charge Combination
Analyze Peptide Array Data and characterize peptide sequence space. Allows for high level visualization of global signal, Quality control based on replicate correlation and/or relative Kd, calculation of peptide Length/Charge/Kd parameters, Hits selection based on RFU Signal, and amino acid composition/basic motif recognition with RFU signal weighting. Basic signal trends can be used to generate peptides that follow the observed compositional trends.