Flexible Population Dynamics Simulations
aae.pop: flexible simulation of multispecies population dynamics
Specify additions or removals in models of population dynamics
Specify covariate dependence in models of population dynamics
Specify density dependence in models of population dynamics
Common forms of density dependence
Specify dispersal between populations in a metapopulation model
Create and update population dynamics objects
Calculate expected minimum population size (EMPS) for a simulate obj...
Calculate expected population size for a simulate object based on ge...
Calculate the cumulative distribution function of a summary statistic ...
Calculate the probability density of a summary statistic across all it...
Isolate elements of population dynamics models
Create a metapopulation dynamics object
Create a population dynamics object with multiple species
Specify interactions between two species
Calculate (quasi-)extinction risk for a simulateobject
Specify replicate-specific covariate dependence in models of populatio...
Calculate (quasi-)extinction risk at multiple thresholds for a `simula...
Random number generators not available in existing R packages
Simulate single or multispecies population dynamics in R
Specify environmental and demographic stochasticity in models of popul...
Functions for a single time-step update
Simulate population dynamics from realistically complex matrix population models in a plug-and-play fashion. Supports aspatial and spatially implicit models with one or more species and time-varying covariates, stochasticity, density dependence, additions or removals of individuals, interspecific interactions, and metapopulations.
Useful links