admtools0.4.0 package

Estimate and Manipulate Age-Depth Models

add_adm_to_multiadm

add adm object ot multiadm object

admtools-package

admtools: Estimate and Manipulate Age-Depth Models

anchor

anchor age-depth model

condensation_fun

condensation function

condensation

condensation with height

flux_const

constant deterministic tracer flux

flux_linear

linear deterministic tracer flux

flux_quad

quadratic deterministic tracer flux

get_completeness

Determine stratigraphic (in)completeness

get_data_from_eTimeOpt

extract data from eTimeOpt results

get_height

determine stratigraphic height deposited at specific time

get_hiat_duration

extract hiatus duration

get_hiat_list

extract hiatus info

get_hiat_no

get no. of hiatuses

get_hiat_pos

get hiatus positions

get_L_tp

get height/length tie point

get_L_unit

extract length unit

get_T_tp

extract time tie points

get_T_unit

extract Time unit

get_time

Determine times based on age-depth model

get_total_duration

Total duration covered

get_total_thickness

get total thickness

is_adm

Is an adm object a valid age-depth model

is_destructive

Is deposition destructive?

is_multiadm

is valid multiadm object?

is_sac

is valid sac objects

L_axis_lab

plot height axis label

make_legend

plot legend

max_height

get highest stratigraphic tie point

max_time

last time tie point

mean_adm

get mean ADM

median_adm

get median ADM

merge_adm_to_multiadm

combine multiple adm ojects into multiadm object

merge_multiadm

merge multiple multiadm objects

min_height

get lowest stratigraphic tie point

min_time

first time tie point

plot_condensation

plot condensation in height

plot_erosive_intervals

mark erosive time intervals

plot_sed_rate_l

plot sed. rate in height

plot_sed_rate_t

plot sedimentation rate in time

plot.adm

plotting adm objects

plot.multiadm

plot multiadm object

plot.sac

plot sediment accumulation curve

plot.stratlist

plot strat list

plot.timelist

plot time lists

quantile_adm

get quantile ADM

sac_to_adm

turn sed. acc curve into adm

sed_rate_from_matrix

make sed rate gen from matrix

sed_rate_gen_from_bounds

seg rate gen from upper/lower bounds

sed_rate_l_fun

sed rate in height function

sed_rate_l

sedimentation rate in stratigraphic height

sed_rate_t_fun

sedimentation rate function

sed_rate_t

sedimentation rate in time domain

sedrate_to_multiadm

Estimate age-depth model from sedimentation rates & tie points

set_L_unit

set length units

set_T_unit

set time units

split_multiadm

split multiadm objects into adm

strat_cont_gen_from_tracer

proxy values in strat domain

strat_cont_to_multiadm

estimate age-depth model from tracer

strat_to_time.list

transform list from height to time domain

strat_to_time.numeric

transform numeric vectors from height to time domain

strat_to_time.phylo

transform phylo object

strat_to_time

transform objects from strat. to time domain

summary.adm

summary of age-depth model

summary.multiadm

summary of age-depth model

summary.sac

summary of sediment accumulation curve

T_axis_lab

plot time axis label

time_to_strat.list

transform list from time to height domain

time_to_strat.numeric

transform vectors from time to height domain

time_to_strat.phylo

transform phylo object

time_to_strat

transform objects from time domain to strat. domain

tp_height_det

deterministic tie points height domain

tp_time_det

deterministic tie points in time domain

tp_time_floating_scale

tie points for floating time scale

tp_time_norm

time tie points with normal distribution

tp_to_adm

Construct age-depth model from tie points

tp_to_sac

define sed. acc. curve

Estimate age-depth models from stratigraphic and sedimentological data, and transform data between the time and stratigraphic domain.

  • Maintainer: Niklas Hohmann
  • License: GPL (>= 3)
  • Last published: 2024-10-03