agriutilities1.2.0 package

Utilities for Data Analysis in Agriculture

check_connectivity

Check connectivity between trials

check_design_met

Check Experimental Design

covcor_heat

Correlation Covariance Heatmap

extract_rcov

Extract Residual Variance-Covariance from ASReml-R

extract_vcov

Extract Variance-Covariance from ASReml-R

fa_summary

Factor Analytic Summary

gg_cor

Triangular Correlation Plot

h_cullis

Cullis heritability for lme4 models

heritability_fa

Heritability for Factor Analytic Models in ASReml-R

met_analysis

Multi-Environmental Trial Analysis

parameters_gg

Genetic Gain Parameters

pipe

Pipe operator

plot.checkAgri

Plot an object of class checkAgri

plot.metAgri

Plot an object of class metAgri

plot.smaAgri

Plot an object of class smaAgri

print.checkAgri

Print an object of class checkAgri

print.metAgri

Print an object of class metAgri

print.smaAgri

Print an object of class smaAgri

single_trial_analysis

Single Trial Analysis

stability

Stability Coefficients

Download source packageRead PDF manual

Utilities designed to make the analysis of field trials easier and more accessible for everyone working in plant breeding. It provides a simple and intuitive interface for conducting single and multi-environmental trial analysis, with minimal coding required. Whether you're a beginner or an experienced user, 'agriutilities' will help you quickly and easily carry out complex analyses with confidence. With built-in functions for fitting Linear Mixed Models, 'agriutilities' is the ideal choice for anyone who wants to save time and focus on interpreting their results. Some of the functions require the R package 'asreml' for the 'ASReml' software, this can be obtained upon purchase from 'VSN' international (<https://vsni.co.uk/software/asreml-r>).

  • Maintainer: Johan Aparicio
  • License: MIT + file LICENSE
  • Last published: 2024-01-20

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