Interface for 'All of Us' Researcher Workbench
allofus: Interface for 'All of Us' Researcher Workbench
Retrieve a cohort from ATLAS for use in All of Us
Move files from a bucket to your workspace
Collect a tbl object and convert integer64 columns to double
Compute a dplyr tbl SQL query into a temp table
Get occurrences of a concept set from AoU for a given cohort
Create a connection to the database in All of Us
Creates a temporary table from a local data frame or tibble
Join current query to another table
List the current files in your bucket
List the current files in your workspace
Generate an observation period table
Print session information for the AoU R environment
Execute a SQL query on the All of Us database
Function to query allofus observation table for survey responses
List tables in the AoU Database
Save a file from your workspace to your bucket
Date add function to be passed along to SQL
Date add function to be passed along to SQL
Date add function to be passed along to SQL
Check to see whether you are on the All of Us workbench
Pipe operator
Date add function to be passed along to SQL
Streamline use of the 'All of Us' Researcher Workbench (<https://www.researchallofus.org/data-tools/workbench/>)with tools to extract and manipulate data from the 'All of Us' database. Increase interoperability with the Observational Health Data Science and Informatics ('OHDSI') tool stack by decreasing reliance of 'All of Us' tools and allowing for cohort creation via 'Atlas'. Improve reproducible and transparent research using 'All of Us'.
Useful links