bayesDiagnostics0.1.0 package

Automated Posterior Predictive Checks

Bayesian Factor Comparison Between Models

bayesDiagnostics Package

Calculate Bayesian P-Values

Calculate Bayesian P-values

KL Divergence Calculation

Calculate Kurtosis

Overlap Coefficient Calculation

Calculate Per-Chain ESS

Calculate Sensitivity Metrics

Calculate Shrinkage

Calculate Skewness

Calculate Test Statistics

Wasserstein Distance Calculation

Check Parameter Convergence

Collect Convergence Warnings

Compute robustness index

Compute sensitivity metric

Convert Format

Create Convergence Plots

Create elicitation diagnostics

Create ESS Plots

Create PPC Plots

Create robustness plots

Create sensitivity guidance

Create Sensitivity Plots

Detect Group Variables

Diagnostic Report for Bayesian Models

Effective Sample Size Diagnostics

Elicit continuous prior

Elicit discrete prior

Elicit proportion prior

Extract All Parameters

Extract Diagnostics

Extract ESS Statistics

Extract from brmsfit

Extract from CmdStanMCMC

Extract from mcmc.list

Extract from stanfit

Extract from stanreg

Extract posterior summary

Extract Posterior Draws (Unified Interface)

Extract Posterior Draws

Generate ESS Recommendations

Generate Posterior Predictive Samples

Generate prior alternatives

Generate prior perturbations

Generate recommendations

Generate stronger version

Generate weaker version

Graphical Posterior Predictive Checks

Hierarchical Model Convergence Diagnostics

Identify concerning parameters

Identify Group Parameters

Identify Population Parameters

Identify Problematic ESS

Interpret Bayes Factor Strength

MCMC Diagnostics Summary

Comprehensive Model Comparison Suite

Plot Bayes Factor Comparison Results

Posterior Predictive Checks

PPC Cross-Validation (LOO-PIT)

Predictive Performance Evaluation

Print Bayes Factor Comparison Results

Prior Elicitation Helper

Prior Robustness Analysis

Prior Sensitivity Analysis

Refit Model with Alternative Prior

Subset Draws

Summarize Convergence

Summarize ESS