Marine Benthic Ecosystem Analysis
Abundance
AZTI Marine Biotic Index (AMBI)
Convert Taxon Names to Comply with WoRMS/TWN
Marine Benthic Ecosystem Analysis
Bray-Curtis Dissimilarity
Ecological Quality Ratio (EQR)
Genus to Species Conversion
Get Supplementary AMBI Sensitivity Groups
Get Infaunal Trophic Index
Harmonize Case
Hill's Diversity Numbers
Hurlbert's Probability of Interspecific Encounter (PIE)
Hurlbert's Expected Number of Species
Test for Azoic Samples
Binomial Namesis_binomial tests for valid binomial names, `generic_n...
Infaunal Trophic Index (ITI)
Margalef Index of Diversity
Pooling
Read and Validate AMBI Sensitivity Data
Read and Validate BEQI2 Input Files
Read and Validate Infaunal Trophic Index Files
Read and Validate Habitat References Files
Read and Validate Taxa Data
Read and Validate Taxa Waterbeheer Nederland (TWN) Data
Rygg's Index of Diversity
Shannon's Index or Entropy
Simpson's Measure of Concentration
Species Richness
Remove Redundant Spaces
Convert Taxon Names to Comply with WoRMS
Total Abundance
Preprocessing tools and biodiversity measures (species abundance, species richness, population heterogeneity and sensitivity) for analysing marine benthic data. See Van Loon et al. (2015) <doi:10.1016/j.seares.2015.05.002> for an application of these tools.