Extract various types of residuals from beta regression models: raw response residuals (observed - fitted), Pearson residuals (raw residuals scaled by square root of variance function), deviance residuals (scaled log-likelihood contributions), and different kinds of weighted residuals suggested by Espinheira et al. (2008).
## S3 method for class 'betareg'residuals(object, type = c("quantile","deviance","pearson","response","weighted","sweighted","sweighted2"),...)
Arguments
object: fitted model object of class "betareg".
type: character indicating type of residuals.
...: currently not used.
Details
The default residuals (starting from version 3.2-0) are quantile residuals as proposed by Dunn and Smyth (1996) and explored in the context of beta regression by Pereira (2017). In case of extended-support beta regression with boundary observations at 0 and/or 1, the quantile residuals for the boundary observations are randomized.
The definitions of all other residuals are provided in Espinheira et al. (2008): Equation 2 for "pearson", last equation on page 409 for "deviance", Equation 6 for "weighted", Equation 7 for "sweighted", and Equation 8 for "sweighted2".
Espinheira et al. (2008) recommend to use "sweighted2", hence this was the default prior to version 3.2-0. However, these are rather burdensome to compute because they require operations of O(n2) and hence are typically prohibitively costly in large sample. Also they are not available for extended-support beta regression. Finally, Pereira (2017) found quantile residuals to have better distributional properties.
References
Cribari-Neto F, Zeileis A (2010). Beta Regression in R. Journal of Statistical Software, 34 (2), 1--24. tools:::Rd_expr_doi("10.18637/jss.v034.i02")
Dunn PK, Smyth GK (1996). Randomized Quantile Residuals. Journal of Computational and Graphical Statistics, 5 (3), 236--244. tools:::Rd_expr_doi("10.2307/1390802")
Espinheira PL, Ferrari SLP, Cribari-Neto F (2008). On Beta Regression Residuals. Journal of Applied Statistics, 35 (4), 407--419. tools:::Rd_expr_doi("10.1080/02664760701834931")
Ferrari SLP, Cribari-Neto F (2004). Beta Regression for Modeling Rates and Proportions. Journal of Applied Statistics, 31 (7), 799--815. tools:::Rd_expr_doi("10.1080/0266476042000214501")
Pereira GHA (2017). On Quantile Residuals in Beta Regression. Communications in Statistics -- Simulation and Computation, 48 (1), 302--316. tools:::Rd_expr_doi("10.1080/03610918.2017.1381740")
Kosmidis I, Zeileis A (2024). Extended-Support Beta Regression for [0, 1] Responses. 2409.07233, arXiv.org E-Print Archive. tools:::Rd_expr_doi("10.48550/arXiv.2409.07233")
See Also
betareg
Examples
options(digits =4)data("GasolineYield", package ="betareg")gy <- betareg(yield ~ gravity + pressure + temp10 + temp, data = GasolineYield)gy_res <- cbind("quantile"= residuals(gy, type ="quantile"),"pearson"= residuals(gy, type ="pearson"),"deviance"= residuals(gy, type ="deviance"),"response"= residuals(gy, type ="response"),"weighted"= residuals(gy, type ="weighted"),"sweighted"= residuals(gy, type ="sweighted"),"sweighted2"= residuals(gy, type ="sweighted2"))pairs(gy_res)cor(gy_res)