A Brain Imaging Data Structure ('BIDS') Parser
'BIDS' project class
'S7' property for 'BIDS' classes
'BIDS' subject class
Low-level abstract class for bidsr
Class definition of 'BIDS' data-set description
Class definition for 'BIDS' meta-data 'GeneratedBy'
Class definitions of 'BIDS' entity
Low-level nested map to store key-value data with inherited structure
bidsr: A Brain Imaging Data Structure ('BIDS') Parser
Class definitions and utilities for 'BIDS' tabular
'BIDS' participant table class
'BIDS' phenotype and assessment table class
'BIDS' samples table class
'BIDS' scans table class
'BIDS' sessions table class
'BIDS' uniform resource indicator ('URI') class definition
Download 'BIDS' example data-sets
Get 'BIDS' entity values from file
Create new bidsr class definition
Class generator for 'BIDS' file class with entities
Parse 'BIDS' entities from file path
Query 'BIDS'
Objects exported from other packages
Resolve path of a 'BIDS' object
Parse and read the files that comply with the brain imaging data structure, or 'BIDS' format, see the publication from Gorgolewski, K., Auer, T., Calhoun, V. et al. (2016) <doi:10.1038/sdata.2016.44>. Provides query functions to extract and check the 'BIDS' entity information (such as subject, session, task, etc.) from the file paths and suffixes according to the specification. The package is developed and used in the reproducible analysis and visualization of intracranial electroencephalography, or 'RAVE', see Magnotti, J. F., Wang, Z., and Beauchamp, M. S. (2020) <doi:10.1016/j.neuroimage.2020.117341>; see 'citation("bidsr")' for details and attributions.
Useful links